Frisina's parents were overjoyed their daughter had been found after police issued several appeals for the missing teen and launched a search across state lines.
But a text message she sent to a friend indicated she was with Rodriguez, CBS reported. Her former soccer coach Rian Rodriguez, 27, is now in jail on a charge of interference with a child's custody.
Authorities said Frisina was believed to be traveling with Rian Rodriguez, 27, in a red Mercury Sable.
"We had a very lovely, wonderful, very emotional reunion with her a little while ago", the teen's mother, Scarlet Frisina, told reporters at a news conference Saturday afternoon.
The Columbia County Sheriff's Office said Caitlyn is being held by police, and her family has been notified. It's believed she left voluntarily with him, authorities said earlier.
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Rian Rodriguez, 27, was taken into custody without incident. "We are emotionally drained, but we are absolutely elated to have her safe". "More to follow as details come in", the Columbia County Sheriff's Office said in a tweet on Friday night.
According to a missing persons report, Frisina left her home through her bedroom window, taking some clothes and her wallet but leaving her cellphone, which had been erased of data.
The officer stopped the auto in Syracuse, New York. Security camera footage from a Fayetteville pawn shop appears to show Caitlyn.
"She's with a person who is 10 years her senior in a supervisory capacity over her as a coach", Hunter said.